Posters
Training and Materials
ASHI 2024
- High-throughput, high-resolution HLA typing using NGS-Pronto nanopore sequencing - a multicentre performance study, Eline ter Steege, Sjoerd Creutzburg, Bart Valkenburg, Anna Hill, Marcel van de Streek, Joris Albers, Loes van de Pasch, Pascal van der Weele, .
- A novel HLA loss assay revealing partial HLA loss, Maaike Rijkers, Job Geerligs, Thijs Finnegan, Lisa Rond, Pedro Mikel Requejo Olaizola, David Monzón Casado, María Dolores de Juan Echavarri, Loes van de Pasch, Maarten Penning, Sake van Wageningen, .
- Sensitive and fast NGS-based chimerism monitoring using ONT sequencing, Maaike Rijkers, Bart Valkenburg, Job Geerligs, Pascal van der Weele, .
- An HLA genotype-informed dPCR assay for monitoring donor-derived cfDNA, Bram Luiken, Lara van der Klugt, Bo Rood, Monica Sorbini, Silvia Deaglio , Tiziana Vaisitti, Bart Valkenburg, Freek Manders, Eleni Draina, Sake van Wageningen, .
ASHI 2022
- Rapid, robust and reliable high resolution HLA typing of 11 HLA loci using ont minion sequencing, Pascal van der Weele, Sjoerd Creutzburg, Bart Valkenburg, Marcel van de Streek, Maarten Penning, .
- Direct vs indirect indexing for NGSBased Chimerism Monitoring, Maaike Rijkers, Pascal van der Weele, Eleni Draina, Johan Crins, Job Geerligs, Loes van de Pasch, Maarten Penning, Erik Rozemuller, .
- Optimizing gene coverage for HLA class II gene sequencing, Sake van Wageningen, Bart Valkenburg, Erik Rozemuller,, .
EFI 2022, Hybrid
- A multiplex whole-gene HLA typing strategy evaluation on various NGS platforms: both long reads (PacBio, MinION), and short reads (Illumina, Ion Torrent, MGI)., Sake van Wageningen, Pascal van der Weele, Bart Valkenburg, Helma de Bruin, Erik Rozemuller, Maarten Penning, .
- Allele-level, whole gene blood group typing with PacBio HiFi sequencing to identify new alleles, Maaike Rijkers1, Loes A.L. van de Pasch1, Daniel Alvarez1, Bart Valkenburg1, Masja de Haas2, Peter C. Ligthart2, Barbera Veldhuisen2, C. Ellen van der Schoot3, Erik H. Rozemuller1, Maarten Penning1, .
- High-resolution HLA haplotypes inference and estimation in a panel of 304 mother-child pairs, Daniel Alvarez1, Loes van de Pasch1, Gideon Hönger2,3,4, Stefan Schaub2,3,4, Erik Rozemuller1, .
- Rapid HLA typing using ONT MinION sequencing, Pascal van der Weele, Sjoerd Creutzburg, Bart Valkenburg, Maarten Penning, .
- Whole Gene KIR genotyping on a commercially available human HLA variation reference panel, Bram Luiken, Fereshte Dadkhodaie, Loes van de Pasch, Maarten Penning, .
ASHI 2021, Hybrid
- A multiplex whole-gene HLA typing strategy evaluation on various platforms: both long reads (PacBio, ONT), and short reads (Illumina, Ion Torrent) , Diya Gao, Sake van Wageningen, Helma de Bruin, Maarten Penning GenDx, Utrecht, The Netherlands, .
- NGStrack® performance and informativity analysis of 154 samples, Pascal van der Weele, Job Geerligs, Jannetje Kooij, Johan Crins, Robert Welleweerd, Loes van de Pasch, Maarten T. Penning, Erik H. Rozemuller, .
EFI 2021, Virtual
- KIR allele level genotyping of a Japanese healthy individual cohort, , P150.
- NGStrack: Chimerism monitoring by means of next-generation sequencing, , P205.
- Development of an independent sequencing workflow for confirmation of homozygous HLA typing results., , P209.
- High-resolution HLA typing with NGSgo-MX6-1 by HiFi NGS data of a PacBio Sequel II platform, , P287.
- The MR1 gene encompasses at least 6 alleles, , P291.
ASHI 2020, Virtual
- High resolution HLA typing with NGSgo-MX6-1 and PacBio HiFi sequencing, Van Wageningen S et al., P182.
ASHI 2019, Pittsburgh, Pennsylvania
- Chimerism monitoring by qPCR, a robust performance from 0.05 to 100%, Bouwmans EE et al., P296.
- Automation of the NGSgo Library Preparation for 96 and 192 Samples on the Biomek i7 Workstation, Luiken B et al., P312.
- A new NGS-based typing strategy for whole-gene HLA-DRA, Van de Pasch LAL et al., P314.
EFI 2019, Lisbon, Portugal
- Combining the Advantages of NGS Long and Short Reads for HLA and KIR Typing, Rozemuller EH et al., P182.
- Whole-Gene NGS-Based High-Resolution Genotyping Strategy for HLA-DPB1, Bouwmans EE et al., P190.
- Replacement of Pre-Transplant DNA with Cell Line DNA in Real-Time PCR Chimerism Monitoring Experiments, Van Wageningen S et al., P201.
ASHI 2018, Baltimore, USA
- Validation of the automated NGSgo Library Preparation - Workflow for HLA Typing on the Biomek 4000, Luiken B et al., P092.
- Chimerism Monitoring by Next-Generation Sequencing: a Multiplatform Comparison, Bouwmans EE et al., P101.
- Performance of a Multiplex PCR Amplification for NGS-Based Typing of Six HLA Genes, Vand de Pasch LAL et al., P102.
EFI, 2018, Venice, Italy
- Automation of the NGSgo Library Preparation - Workflow for HLA typing on the Biomek 4000 Workstation, Luiken B et al., P129.
- Automatic NGS HLA Data Analysis Using NGSignition and NGSserver, Rozemuller EH et al., P130.
- NGS-based KIR typing at high resolution: challenges and solutions for the KIR framework genes, Van de Pasch LAL et al., P141.
- A novel NGS-based high-resolution genotyping strategy for HLA-E, Van de Pasch LAL et al., P145.
